Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cul4aQ3TCH7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cul4aQ3TCH7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cul4aQ3TCH7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cul4aQ3TCH7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm24934-201ENSMUST00000103764 111 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm23912-201ENSMUST00000104687 87 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm13570-201ENSMUST00000140763 309 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm7653-201ENSMUST00000214567 508 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.83□□□□□ -0.36
Cul4aQ3TCH7 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms