Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm13342-201ENSMUST00000121055 207 ntBASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm27390-201ENSMUST00000184516 176 ntBASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.32□□□□□ -0.44
Pfdn6Q03958 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfdn6Q03958 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm42627-201ENSMUST00000197347 224 ntBASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm8227-201ENSMUST00000223306 571 ntBASIC12.31□□□□□ -0.44
Pfdn6Q03958 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.31□□□□□ -0.44
Pfdn6Q03958 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pfdn6Q03958 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.3□□□□□ -0.44
Pfdn6Q03958 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Gm9083-201ENSMUST00000120423 819 ntBASIC12.3□□□□□ -0.44
Pfdn6Q03958 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.3□□□□□ -0.44
Pfdn6Q03958 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.3□□□□□ -0.44
Pfdn6Q03958 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.3□□□□□ -0.44
Pfdn6Q03958 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms