Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.18□□□□□ -0.62
Scn1bP97952 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Scn1bP97952 Gm12291-201ENSMUST00000121627 311 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 Gm11978-201ENSMUST00000122315 466 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.18□□□□□ -0.62
Scn1bP97952 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.18□□□□□ -0.62
Scn1bP97952 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.18□□□□□ -0.62
Scn1bP97952 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.18□□□□□ -0.62
Scn1bP97952 Gm44855-201ENSMUST00000205725 362 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Btrc-209ENSMUST00000224478 2194 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Scn1bP97952 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.18□□□□□ -0.62
Scn1bP97952 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Scn1bP97952 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Scn1bP97952 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scn1bP97952 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Scn1bP97952 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Rgr-203ENSMUST00000225070 4704 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Scn1bP97952 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.17□□□□□ -0.62
Scn1bP97952 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Scn1bP97952 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.17□□□□□ -0.62
Scn1bP97952 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scn1bP97952 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scn1bP97952 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scn1bP97952 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scn1bP97952 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Scn1bP97952 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scn1bP97952 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scn1bP97952 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scn1bP97952 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scn1bP97952 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms