Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cacna1aP97445 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm22144-201ENSMUST00000157402 102 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Mir7076-201ENSMUST00000183519 74 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm44980-201ENSMUST00000205826 314 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm4157-201ENSMUST00000211647 679 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm2965-201ENSMUST00000198365 343 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Gm9132-201ENSMUST00000210182 832 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.31□□□□□ -0.6
Cacna1aP97445 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm22133-201ENSMUST00000102082 109 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm12218-201ENSMUST00000117666 399 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm23771-201ENSMUST00000178702 110 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Mir8115-201ENSMUST00000184992 119 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm26286-201ENSMUST00000104166 134 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm13263-201ENSMUST00000121271 838 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm21092-201ENSMUST00000178995 955 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Mir6998-201ENSMUST00000183343 64 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.3□□□□□ -0.6
Cacna1aP97445 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cacna1aP97445 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms