Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm4654-201ENSMUST00000183305 982 ntBASIC15.3■□□□□ 0.04
Nkx2-3P97334 Mir7076-201ENSMUST00000183519 74 ntBASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Gm7600-201ENSMUST00000209657 785 ntBASIC15.3■□□□□ 0.04
Nkx2-3P97334 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx2-3P97334 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm15207-201ENSMUST00000119259 442 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm11675-201ENSMUST00000121873 832 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Mir1901-201ENSMUST00000122616 78 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm22138-201ENSMUST00000158748 128 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm8194-201ENSMUST00000159783 859 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Mir6958-201ENSMUST00000184207 73 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm38210-201ENSMUST00000191944 809 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm42657-201ENSMUST00000201746 211 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.29■□□□□ 0.04
Nkx2-3P97334 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-3P97334 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm25076-201ENSMUST00000104098 132 ntBASIC15.28■□□□□ 0.04
Nkx2-3P97334 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm12419-201ENSMUST00000116649 636 ntBASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm11246-201ENSMUST00000120880 345 ntBASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.28■□□□□ 0.04
Nkx2-3P97334 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.28■□□□□ 0.04
Nkx2-3P97334 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms