Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm27023-201ENSMUST00000182372 285 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm27731-201ENSMUST00000185192 107 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm6266-201ENSMUST00000203844 806 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm18164-201ENSMUST00000213769 927 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Gm18166-201ENSMUST00000215557 927 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hmgb1P63158 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hmgb1P63158 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hmgb1P63158 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.5□□□□□ -0.25
Hmgb1P63158 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.49□□□□□ -0.25
Hmgb1P63158 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.49□□□□□ -0.25
Hmgb1P63158 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.49□□□□□ -0.25
Hmgb1P63158 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hmgb1P63158 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hmgb1P63158 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.48□□□□□ -0.25
Hmgb1P63158 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Hmgb1P63158 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.48□□□□□ -0.25
Hmgb1P63158 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hmgb1P63158 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms