Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm15467-201ENSMUST00000120582 445 ntBASIC11.11□□□□□ -0.63
Lsm3P62311 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm3P62311 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.11□□□□□ -0.63
Lsm3P62311 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lsm3P62311 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Lsm3P62311 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.1□□□□□ -0.63
Lsm3P62311 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm27321-201ENSMUST00000185021 205 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.1□□□□□ -0.63
Lsm3P62311 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm16372-201ENSMUST00000073088 450 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Lsm3P62311 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Lsm3P62311 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.1□□□□□ -0.63
Lsm3P62311 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Lsm3P62311 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm3P62311 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm3P62311 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm3P62311 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm3P62311 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms