Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.08□□□□□ -0.64
Vbp1P61759 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vbp1P61759 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vbp1P61759 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.08□□□□□ -0.64
Vbp1P61759 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.08□□□□□ -0.64
Vbp1P61759 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Gm27321-201ENSMUST00000185021 205 ntBASIC11.08□□□□□ -0.64
Vbp1P61759 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.08□□□□□ -0.64
Vbp1P61759 Gm7774-201ENSMUST00000200064 533 ntBASIC11.08□□□□□ -0.64
Vbp1P61759 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.08□□□□□ -0.64
Vbp1P61759 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.08□□□□□ -0.64
Vbp1P61759 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Vbp1P61759 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.08□□□□□ -0.64
Vbp1P61759 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vbp1P61759 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vbp1P61759 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vbp1P61759 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Vbp1P61759 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.07□□□□□ -0.64
Vbp1P61759 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Vbp1P61759 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Vbp1P61759 Gm4875-201ENSMUST00000118257 786 ntBASIC11.07□□□□□ -0.64
Vbp1P61759 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Vbp1P61759 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.07□□□□□ -0.64
Vbp1P61759 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.07□□□□□ -0.64
Vbp1P61759 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Vbp1P61759 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.07□□□□□ -0.64
Vbp1P61759 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.07□□□□□ -0.64
Vbp1P61759 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Vbp1P61759 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vbp1P61759 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vbp1P61759 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.07□□□□□ -0.64
Vbp1P61759 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vbp1P61759 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Vbp1P61759 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Vbp1P61759 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Vbp1P61759 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vbp1P61759 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Vbp1P61759 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Gm14921-201ENSMUST00000118643 908 ntBASIC11.06□□□□□ -0.64
Vbp1P61759 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.06□□□□□ -0.64
Vbp1P61759 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vbp1P61759 Gm44069-201ENSMUST00000204898 506 ntBASIC11.06□□□□□ -0.64
Vbp1P61759 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.06□□□□□ -0.64
Vbp1P61759 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.06□□□□□ -0.64
Vbp1P61759 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vbp1P61759 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms