Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.8□□□□□ -0.2
Rrp1P56183 Gm44405-201ENSMUST00000198952 126 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Gm39404-201ENSMUST00000216350 313 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rrp1P56183 Gm9396-201ENSMUST00000076703 567 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Gm26232-201ENSMUST00000083360 166 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rrp1P56183 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rrp1P56183 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.8□□□□□ -0.2
Rrp1P56183 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rrp1P56183 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Gm12036-201ENSMUST00000120008 530 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Gm12502-201ENSMUST00000120197 444 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Gm13342-201ENSMUST00000121055 207 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.79□□□□□ -0.2
Rrp1P56183 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Rrp1P56183 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.79□□□□□ -0.2
Rrp1P56183 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rrp1P56183 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rrp1P56183 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Rrp1P56183 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.78□□□□□ -0.2
Rrp1P56183 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rrp1P56183 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Gm12390-201ENSMUST00000117897 397 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 Gm18584-201ENSMUST00000203098 964 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 Gm5904-201ENSMUST00000210286 865 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.78□□□□□ -0.2
Rrp1P56183 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Gm10076-201ENSMUST00000073238 384 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.78□□□□□ -0.2
Rrp1P56183 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rrp1P56183 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.78□□□□□ -0.2
Rrp1P56183 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rrp1P56183 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rrp1P56183 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rrp1P56183 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rrp1P56183 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms