Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Msh6P54276 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Msh6P54276 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Msh6P54276 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.42■□□□□ 0.06
Msh6P54276 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Msh6P54276 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Msh6P54276 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.42■□□□□ 0.06
Msh6P54276 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.42■□□□□ 0.06
Msh6P54276 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh6P54276 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.41■□□□□ 0.06
Msh6P54276 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Msh6P54276 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Msh6P54276 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.41■□□□□ 0.06
Msh6P54276 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.41■□□□□ 0.06
Msh6P54276 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Gm23771-201ENSMUST00000178702 110 ntBASIC15.41■□□□□ 0.06
Msh6P54276 Mir8115-201ENSMUST00000184992 119 ntBASIC15.41■□□□□ 0.06
Msh6P54276 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Gm18893-201ENSMUST00000198416 943 ntBASIC15.41■□□□□ 0.06
Msh6P54276 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.41■□□□□ 0.06
Msh6P54276 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Msh6P54276 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh6P54276 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Msh6P54276 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Msh6P54276 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Msh6P54276 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.4■□□□□ 0.06
Msh6P54276 Gm11451-201ENSMUST00000118946 630 ntBASIC15.4■□□□□ 0.06
Msh6P54276 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.4■□□□□ 0.06
Msh6P54276 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Msh6P54276 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.4■□□□□ 0.06
Msh6P54276 Gm44980-201ENSMUST00000205826 314 ntBASIC15.4■□□□□ 0.06
Msh6P54276 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.4■□□□□ 0.06
Msh6P54276 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Msh6P54276 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.4■□□□□ 0.06
Msh6P54276 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Gm25517-201ENSMUST00000083865 134 ntBASIC15.4■□□□□ 0.06
Msh6P54276 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Msh6P54276 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Msh6P54276 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh6P54276 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.39■□□□□ 0.05
Msh6P54276 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.39■□□□□ 0.05
Msh6P54276 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Msh6P54276 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Gm13263-201ENSMUST00000121271 838 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms