Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Rmrp-201ENSMUST00000157463 271 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Mir1938-201ENSMUST00000158746 100 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Mir7085-201ENSMUST00000184353 66 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.06□□□□□ -0.64
Rfx3P48381 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.06□□□□□ -0.64
Rfx3P48381 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.06□□□□□ -0.64
Rfx3P48381 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.06□□□□□ -0.64
Rfx3P48381 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rfx3P48381 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Rfx3P48381 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.06□□□□□ -0.64
Rfx3P48381 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rfx3P48381 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.06□□□□□ -0.64
Rfx3P48381 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rfx3P48381 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rfx3P48381 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Rfx3P48381 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm24231-201ENSMUST00000104315 133 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms