Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rfx2P48379 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Rfx2P48379 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Rfx2P48379 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.86□□□□□ -0.35
Rfx2P48379 Gm14028-201ENSMUST00000117434 479 ntBASIC12.86□□□□□ -0.35
Rfx2P48379 Gm13296-201ENSMUST00000117854 997 ntBASIC12.86□□□□□ -0.35
Rfx2P48379 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rfx2P48379 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Rprl1-202ENSMUST00000198476 238 ntBASIC12.86□□□□□ -0.35
Rfx2P48379 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.86□□□□□ -0.35
Rfx2P48379 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rfx2P48379 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rfx2P48379 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.86□□□□□ -0.35
Rfx2P48379 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfx2P48379 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rfx2P48379 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfx2P48379 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rfx2P48379 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Gm12314-201ENSMUST00000118104 538 ntBASIC12.85□□□□□ -0.35
Rfx2P48379 Gm4909-201ENSMUST00000118749 794 ntBASIC12.85□□□□□ -0.35
Rfx2P48379 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfx2P48379 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.85□□□□□ -0.35
Rfx2P48379 Gm27341-201ENSMUST00000183570 106 ntBASIC12.85□□□□□ -0.35
Rfx2P48379 Gm43138-201ENSMUST00000199123 708 ntBASIC12.85□□□□□ -0.35
Rfx2P48379 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.85□□□□□ -0.35
Rfx2P48379 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rfx2P48379 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rfx2P48379 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfx2P48379 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfx2P48379 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Rfx2P48379 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rfx2P48379 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Gm15703-201ENSMUST00000120250 880 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Gm13315-201ENSMUST00000120376 991 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Gm14832-201ENSMUST00000121289 322 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Rfx2P48379 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Rmrp-201ENSMUST00000157463 271 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfx2P48379 Gm25700-201ENSMUST00000177693 110 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.84□□□□□ -0.35
Rfx2P48379 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Rfx2P48379 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms