Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.29□□□□□ -0.76
Hmx3P42581 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Hmx3P42581 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hmx3P42581 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Hmx3P42581 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Hmx3P42581 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.28□□□□□ -0.76
Hmx3P42581 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Hmx3P42581 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.28□□□□□ -0.76
Hmx3P42581 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.28□□□□□ -0.76
Hmx3P42581 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.28□□□□□ -0.76
Hmx3P42581 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hmx3P42581 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.28□□□□□ -0.76
Hmx3P42581 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Gm15823-201ENSMUST00000064305 670 ntBASIC10.28□□□□□ -0.76
Hmx3P42581 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Hmx3P42581 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.28□□□□□ -0.76
Hmx3P42581 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Hmx3P42581 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hmx3P42581 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hmx3P42581 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Hmx3P42581 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.27□□□□□ -0.77
Hmx3P42581 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.27□□□□□ -0.77
Hmx3P42581 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Hmx3P42581 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.27□□□□□ -0.77
Hmx3P42581 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.27□□□□□ -0.77
Hmx3P42581 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.27□□□□□ -0.77
Hmx3P42581 Gm44397-201ENSMUST00000195950 113 ntBASIC10.27□□□□□ -0.77
Hmx3P42581 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.27□□□□□ -0.77
Hmx3P42581 Gm44124-201ENSMUST00000204159 472 ntBASIC10.27□□□□□ -0.77
Hmx3P42581 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Hmx3P42581 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.27□□□□□ -0.77
Hmx3P42581 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.27□□□□□ -0.77
Hmx3P42581 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.27□□□□□ -0.77
Hmx3P42581 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.27□□□□□ -0.77
Hmx3P42581 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hmx3P42581 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Hmx3P42581 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms