Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm25214-201ENSMUST00000104573 129 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm14109-201ENSMUST00000118814 309 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Gm13736-201ENSMUST00000119272 253 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Gm13813-201ENSMUST00000120998 787 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Gm14017-201ENSMUST00000121934 386 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Timp3P39876 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Gm18212-201ENSMUST00000211678 889 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.08□□□□□ -0.8
Timp3P39876 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.08□□□□□ -0.8
Timp3P39876 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.08□□□□□ -0.8
Timp3P39876 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.08□□□□□ -0.8
Timp3P39876 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.07□□□□□ -0.8
Timp3P39876 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.07□□□□□ -0.8
Timp3P39876 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.07□□□□□ -0.8
Timp3P39876 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.07□□□□□ -0.8
Timp3P39876 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.07□□□□□ -0.8
Timp3P39876 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Gm14130-201ENSMUST00000118417 987 ntBASIC10.07□□□□□ -0.8
Timp3P39876 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.07□□□□□ -0.8
Timp3P39876 Gm16296-201ENSMUST00000159905 325 ntBASIC10.07□□□□□ -0.8
Timp3P39876 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.07□□□□□ -0.8
Timp3P39876 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Timp3P39876 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.07□□□□□ -0.8
Timp3P39876 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.07□□□□□ -0.8
Timp3P39876 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.07□□□□□ -0.8
Timp3P39876 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms