Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm12628-201ENSMUST00000122193 382 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm6485-201ENSMUST00000160676 439 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Mir8115-201ENSMUST00000184992 119 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.3□□□□□ -0.6
Sftpa1P35242 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.3□□□□□ -0.6
Sftpa1P35242 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sftpa1P35242 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm26286-201ENSMUST00000104166 134 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm11949-201ENSMUST00000117640 372 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm13937-201ENSMUST00000121000 988 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm13182-201ENSMUST00000122241 312 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Mir1956-201ENSMUST00000157748 65 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Rprl1-201ENSMUST00000158050 327 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm28388-201ENSMUST00000186262 437 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Gm9797-202ENSMUST00000218003 294 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.29□□□□□ -0.6
Sftpa1P35242 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sftpa1P35242 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sftpa1P35242 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.28□□□□□ -0.6
Sftpa1P35242 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.28□□□□□ -0.6
Sftpa1P35242 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sftpa1P35242 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms