Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rom1P32958 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.66□□□□□ -0.86
Rom1P32958 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.66□□□□□ -0.86
Rom1P32958 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.66□□□□□ -0.86
Rom1P32958 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Rom1P32958 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rom1P32958 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rom1P32958 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rom1P32958 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Rom1P32958 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Rom1P32958 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Rom1P32958 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Rom1P32958 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Gm12341-201ENSMUST00000119724 503 ntBASIC9.65□□□□□ -0.86
Rom1P32958 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Rom1P32958 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Gm9022-201ENSMUST00000182482 992 ntBASIC9.65□□□□□ -0.86
Rom1P32958 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Gm27331-201ENSMUST00000183705 60 ntBASIC9.65□□□□□ -0.86
Rom1P32958 Gm27989-201ENSMUST00000184721 107 ntBASIC9.65□□□□□ -0.86
Rom1P32958 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.65□□□□□ -0.86
Rom1P32958 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Rom1P32958 Gm8420-201ENSMUST00000097103 598 ntBASIC9.65□□□□□ -0.86
Rom1P32958 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rom1P32958 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rom1P32958 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.65□□□□□ -0.87
Rom1P32958 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rom1P32958 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.64□□□□□ -0.87
Rom1P32958 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Rom1P32958 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Rom1P32958 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Gm14719-201ENSMUST00000121891 340 ntBASIC9.64□□□□□ -0.87
Rom1P32958 Gm11594-201ENSMUST00000122313 162 ntBASIC9.64□□□□□ -0.87
Rom1P32958 Gm15487-201ENSMUST00000122373 465 ntBASIC9.64□□□□□ -0.87
Rom1P32958 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.64□□□□□ -0.87
Rom1P32958 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rom1P32958 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms