Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 Gm12291-201ENSMUST00000121627 311 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc6a1P31648 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc6a1P31648 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.54□□□□□ -0.72
Slc6a1P31648 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.54□□□□□ -0.72
Slc6a1P31648 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc6a1P31648 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc6a1P31648 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm15429-201ENSMUST00000151268 798 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm17150-201ENSMUST00000165577 381 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm8602-201ENSMUST00000184045 607 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm27486-201ENSMUST00000184923 80 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm29608-201ENSMUST00000190444 463 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms