Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col2a1P28481 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col2a1P28481 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col2a1P28481 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col2a1P28481 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col2a1P28481 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 Gm3551-201ENSMUST00000190750 664 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col2a1P28481 Gm4978-201ENSMUST00000071565 801 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 Gm5451-201ENSMUST00000080545 579 ntBASIC13.71□□□□□ -0.21
Col2a1P28481 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col2a1P28481 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col2a1P28481 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Col2a1P28481 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col2a1P28481 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.71□□□□□ -0.22
Col2a1P28481 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.71□□□□□ -0.22
Col2a1P28481 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col2a1P28481 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col2a1P28481 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Col2a1P28481 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm6485-201ENSMUST00000160676 439 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.7□□□□□ -0.22
Col2a1P28481 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Gm37299-201ENSMUST00000193951 826 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Col2a1P28481 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Col2a1P28481 Olfr584-201ENSMUST00000098210 964 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.7□□□□□ -0.22
Col2a1P28481 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.7□□□□□ -0.22
Col2a1P28481 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col2a1P28481 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col2a1P28481 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.69□□□□□ -0.22
Col2a1P28481 Gm7150-201ENSMUST00000122032 981 ntBASIC13.69□□□□□ -0.22
Col2a1P28481 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.69□□□□□ -0.22
Col2a1P28481 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.69□□□□□ -0.22
Col2a1P28481 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col2a1P28481 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms