Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.55□□□□□ -0.24
Hoxc6P10629 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hoxc6P10629 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.55□□□□□ -0.24
Hoxc6P10629 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hoxc6P10629 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc6P10629 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm14193-201ENSMUST00000105067 153 ntBASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm11949-201ENSMUST00000117640 372 ntBASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm11660-201ENSMUST00000120955 412 ntBASIC13.54□□□□□ -0.24
Hoxc6P10629 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm8815-201ENSMUST00000173809 620 ntBASIC13.54□□□□□ -0.24
Hoxc6P10629 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm8492-201ENSMUST00000182375 987 ntBASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxc6P10629 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.54□□□□□ -0.24
Hoxc6P10629 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hoxc6P10629 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.54□□□□□ -0.24
Hoxc6P10629 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hoxc6P10629 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc6P10629 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hoxc6P10629 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gm22920-201ENSMUST00000102175 109 ntBASIC13.53□□□□□ -0.24
Hoxc6P10629 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gm25072-201ENSMUST00000175233 235 ntBASIC13.53□□□□□ -0.24
Hoxc6P10629 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxc6P10629 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.53□□□□□ -0.24
Hoxc6P10629 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxc6P10629 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.53□□□□□ -0.24
Hoxc6P10629 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc6P10629 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc6P10629 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc6P10629 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.52□□□□□ -0.24
Hoxc6P10629 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.52□□□□□ -0.24
Hoxc6P10629 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc6P10629 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc6P10629 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Hoxc6P10629 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc6P10629 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms