Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Gm5706-201ENSMUST00000181525 993 ntBASIC10.56□□□□□ -0.72
Igh-VJ558P01758 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Gm30285-201ENSMUST00000214614 422 ntBASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igh-VJ558P01758 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm14127-201ENSMUST00000117906 678 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm26956-201ENSMUST00000182176 986 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igh-VJ558P01758 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Igh-VJ558P01758 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms