Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.61□□□□□ -0.39
CopeO89079 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.61□□□□□ -0.39
CopeO89079 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.61□□□□□ -0.39
CopeO89079 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.61□□□□□ -0.39
CopeO89079 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.61□□□□□ -0.39
CopeO89079 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.61□□□□□ -0.39
CopeO89079 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CopeO89079 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.61□□□□□ -0.39
CopeO89079 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CopeO89079 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CopeO89079 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.6□□□□□ -0.39
CopeO89079 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
CopeO89079 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.6□□□□□ -0.39
CopeO89079 Gm24644-201ENSMUST00000157114 139 ntBASIC12.6□□□□□ -0.39
CopeO89079 Gm7029-201ENSMUST00000173226 450 ntBASIC12.6□□□□□ -0.39
CopeO89079 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.6□□□□□ -0.39
CopeO89079 Gm27892-201ENSMUST00000185017 106 ntBASIC12.6□□□□□ -0.39
CopeO89079 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.6□□□□□ -0.39
CopeO89079 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.6□□□□□ -0.39
CopeO89079 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.6□□□□□ -0.39
CopeO89079 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopeO89079 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CopeO89079 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CopeO89079 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.6□□□□□ -0.39
CopeO89079 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.6□□□□□ -0.39
CopeO89079 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CopeO89079 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.59□□□□□ -0.39
CopeO89079 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.59□□□□□ -0.39
CopeO89079 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.59□□□□□ -0.39
CopeO89079 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Gm27486-201ENSMUST00000184923 80 ntBASIC12.59□□□□□ -0.39
CopeO89079 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.59□□□□□ -0.39
CopeO89079 Gm44958-201ENSMUST00000203734 736 ntBASIC12.59□□□□□ -0.39
CopeO89079 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.59□□□□□ -0.39
CopeO89079 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.59□□□□□ -0.39
CopeO89079 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CopeO89079 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CopeO89079 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CopeO89079 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms