Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Syn1O88935 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.63□□□□□ -0.39
Syn1O88935 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.63□□□□□ -0.39
Syn1O88935 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.63□□□□□ -0.39
Syn1O88935 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.63□□□□□ -0.39
Syn1O88935 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.63□□□□□ -0.39
Syn1O88935 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.63□□□□□ -0.39
Syn1O88935 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.63□□□□□ -0.39
Syn1O88935 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.63□□□□□ -0.39
Syn1O88935 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.63□□□□□ -0.39
Syn1O88935 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.63□□□□□ -0.39
Syn1O88935 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.63□□□□□ -0.39
Syn1O88935 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.63□□□□□ -0.39
Syn1O88935 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Syn1O88935 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Syn1O88935 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.63□□□□□ -0.39
Syn1O88935 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Syn1O88935 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.63□□□□□ -0.39
Syn1O88935 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Syn1O88935 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syn1O88935 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Syn1O88935 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Syn1O88935 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Gm25063-201ENSMUST00000104666 94 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Gm11509-201ENSMUST00000117358 325 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Gm12036-201ENSMUST00000120008 530 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.62□□□□□ -0.39
Syn1O88935 Gm23045-201ENSMUST00000175041 96 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Syn1O88935 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Mir8115-201ENSMUST00000184992 119 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Syn1O88935 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.62□□□□□ -0.39
Syn1O88935 Gm4604-201ENSMUST00000025040 390 ntBASIC12.62□□□□□ -0.39
Syn1O88935 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.62□□□□□ -0.39
Syn1O88935 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Syn1O88935 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.62□□□□□ -0.39
Syn1O88935 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syn1O88935 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Syn1O88935 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms