Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.75□□□□□ -0.53
Hcn1O88704 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.75□□□□□ -0.53
Hcn1O88704 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm43179-201ENSMUST00000198797 275 ntBASIC11.75□□□□□ -0.53
Hcn1O88704 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm18935-201ENSMUST00000212692 664 ntBASIC11.75□□□□□ -0.53
Hcn1O88704 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hcn1O88704 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Hcn1O88704 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Hcn1O88704 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.74□□□□□ -0.53
Hcn1O88704 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hcn1O88704 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hcn1O88704 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hcn1O88704 Mospd4-201ENSMUST00000180618 576 ntBASIC11.74□□□□□ -0.53
Hcn1O88704 Gm27516-201ENSMUST00000184237 98 ntBASIC11.74□□□□□ -0.53
Hcn1O88704 Mir8109-201ENSMUST00000184375 117 ntBASIC11.74□□□□□ -0.53
Hcn1O88704 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hcn1O88704 Gm24526-201ENSMUST00000082921 158 ntBASIC11.74□□□□□ -0.53
Hcn1O88704 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.74□□□□□ -0.53
Hcn1O88704 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.74□□□□□ -0.53
Hcn1O88704 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hcn1O88704 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hcn1O88704 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hcn1O88704 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcn1O88704 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.73□□□□□ -0.53
Hcn1O88704 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms