Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.04□□□□□ -0.48
ClppO88696 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.04□□□□□ -0.48
ClppO88696 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ClppO88696 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Mir3102-201ENSMUST00000175555 104 ntBASIC12.04□□□□□ -0.48
ClppO88696 Gm3096-201ENSMUST00000185770 364 ntBASIC12.04□□□□□ -0.48
ClppO88696 Gm18827-201ENSMUST00000188341 790 ntBASIC12.04□□□□□ -0.48
ClppO88696 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.04□□□□□ -0.48
ClppO88696 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.04□□□□□ -0.48
ClppO88696 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.04□□□□□ -0.48
ClppO88696 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.04□□□□□ -0.48
ClppO88696 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ClppO88696 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.04□□□□□ -0.48
ClppO88696 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ClppO88696 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.04□□□□□ -0.48
ClppO88696 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClppO88696 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ClppO88696 Gm23270-201ENSMUST00000104055 131 ntBASIC12.03□□□□□ -0.48
ClppO88696 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ClppO88696 Gm14130-201ENSMUST00000118417 987 ntBASIC12.03□□□□□ -0.48
ClppO88696 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ClppO88696 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ClppO88696 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Gm8018-201ENSMUST00000173536 789 ntBASIC12.03□□□□□ -0.48
ClppO88696 Gm27023-201ENSMUST00000182372 285 ntBASIC12.03□□□□□ -0.48
ClppO88696 Gm44405-201ENSMUST00000198952 126 ntBASIC12.03□□□□□ -0.48
ClppO88696 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.03□□□□□ -0.48
ClppO88696 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.03□□□□□ -0.48
ClppO88696 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.03□□□□□ -0.48
ClppO88696 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.03□□□□□ -0.48
ClppO88696 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.03□□□□□ -0.48
ClppO88696 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.03□□□□□ -0.48
ClppO88696 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClppO88696 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ClppO88696 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.02□□□□□ -0.48
ClppO88696 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.02□□□□□ -0.48
ClppO88696 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ClppO88696 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.02□□□□□ -0.48
ClppO88696 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms