Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.06□□□□□ -0.16
Copb2O55029 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.06□□□□□ -0.16
Copb2O55029 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.06□□□□□ -0.16
Copb2O55029 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.06□□□□□ -0.16
Copb2O55029 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.05□□□□□ -0.16
Copb2O55029 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Copb2O55029 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Gm15515-201ENSMUST00000117827 822 ntBASIC14.05□□□□□ -0.16
Copb2O55029 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.05□□□□□ -0.16
Copb2O55029 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.05□□□□□ -0.16
Copb2O55029 Gm44100-201ENSMUST00000204329 436 ntBASIC14.05□□□□□ -0.16
Copb2O55029 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Copb2O55029 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.05□□□□□ -0.16
Copb2O55029 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Copb2O55029 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.04□□□□□ -0.16
Copb2O55029 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.04□□□□□ -0.16
Copb2O55029 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.04□□□□□ -0.16
Copb2O55029 Gm18734-201ENSMUST00000172937 808 ntBASIC14.04□□□□□ -0.16
Copb2O55029 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Gm42997-202ENSMUST00000200321 985 ntBASIC14.04□□□□□ -0.16
Copb2O55029 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.04□□□□□ -0.16
Copb2O55029 Gm7848-201ENSMUST00000210739 718 ntBASIC14.04□□□□□ -0.16
Copb2O55029 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.04□□□□□ -0.16
Copb2O55029 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.04□□□□□ -0.16
Copb2O55029 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.04□□□□□ -0.16
Copb2O55029 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.04□□□□□ -0.16
Copb2O55029 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Copb2O55029 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Copb2O55029 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.04□□□□□ -0.16
Copb2O55029 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.03□□□□□ -0.16
Copb2O55029 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms