Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ChkaO54804 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.37□□□□□ -0.43
ChkaO54804 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ChkaO54804 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.37□□□□□ -0.43
ChkaO54804 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Gm13316-201ENSMUST00000140537 691 ntBASIC12.37□□□□□ -0.43
ChkaO54804 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.37□□□□□ -0.43
ChkaO54804 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.37□□□□□ -0.43
ChkaO54804 Gm27514-201ENSMUST00000183692 110 ntBASIC12.37□□□□□ -0.43
ChkaO54804 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.37□□□□□ -0.43
ChkaO54804 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.37□□□□□ -0.43
ChkaO54804 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ChkaO54804 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ChkaO54804 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.37□□□□□ -0.43
ChkaO54804 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.37□□□□□ -0.43
ChkaO54804 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ChkaO54804 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ChkaO54804 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
ChkaO54804 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.37□□□□□ -0.43
ChkaO54804 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ChkaO54804 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.36□□□□□ -0.43
ChkaO54804 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.36□□□□□ -0.43
ChkaO54804 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.36□□□□□ -0.43
ChkaO54804 Gm24830-201ENSMUST00000102024 166 ntBASIC12.36□□□□□ -0.43
ChkaO54804 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.36□□□□□ -0.43
ChkaO54804 Gm14999-201ENSMUST00000121039 624 ntBASIC12.36□□□□□ -0.43
ChkaO54804 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ChkaO54804 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Gm43433-201ENSMUST00000196573 481 ntBASIC12.36□□□□□ -0.43
ChkaO54804 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.36□□□□□ -0.43
ChkaO54804 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ChkaO54804 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
ChkaO54804 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ChkaO54804 Gm26232-201ENSMUST00000083360 166 ntBASIC12.36□□□□□ -0.43
ChkaO54804 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.36□□□□□ -0.43
ChkaO54804 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ChkaO54804 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ChkaO54804 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ChkaO54804 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ChkaO54804 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
ChkaO54804 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ChkaO54804 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ChkaO54804 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ChkaO54804 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ChkaO54804 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ChkaO54804 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ChkaO54804 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms