Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC18.49■□□□□ 0.55
Polr1aO35134 Gm45410-201ENSMUST00000211331 1093 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 AC114645.1-201ENSMUST00000215831 187 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 CT009527.1-201ENSMUST00000224205 339 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Polr1aO35134 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Polr1aO35134 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Polr1aO35134 Mir483-201ENSMUST00000093631 73 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Polr1aO35134 Gm6655-201ENSMUST00000201932 1309 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Polr1aO35134 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Gm15374-201ENSMUST00000119313 844 ntBASIC18.48■□□□□ 0.55
Polr1aO35134 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC18.48■□□□□ 0.55
Polr1aO35134 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC18.48■□□□□ 0.55
Polr1aO35134 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC18.48■□□□□ 0.55
Polr1aO35134 Gm8436-201ENSMUST00000210152 1080 ntBASIC18.48■□□□□ 0.55
Polr1aO35134 Gm5749-201ENSMUST00000210673 1090 ntBASIC18.48■□□□□ 0.55
Polr1aO35134 Gm4811-201ENSMUST00000220879 1220 ntBASIC18.48■□□□□ 0.55
Polr1aO35134 CT573047.1-201ENSMUST00000223652 851 ntBASIC18.48■□□□□ 0.55
Polr1aO35134 AC129308.3-201ENSMUST00000225652 524 ntBASIC18.48■□□□□ 0.55
Polr1aO35134 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Polr1aO35134 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Polr1aO35134 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC18.48■□□□□ 0.55
Polr1aO35134 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Polr1aO35134 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Polr1aO35134 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Polr1aO35134 Gm14807-201ENSMUST00000116640 983 ntBASIC18.47■□□□□ 0.55
Polr1aO35134 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC18.47■□□□□ 0.55
Polr1aO35134 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC18.47■□□□□ 0.55
Polr1aO35134 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Polr1aO35134 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Polr1aO35134 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC18.47■□□□□ 0.55
Polr1aO35134 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Polr1aO35134 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr1aO35134 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm44552-201ENSMUST00000205458 1247 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 AC154572.1-201ENSMUST00000226098 1204 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC18.46■□□□□ 0.55
Polr1aO35134 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC18.46■□□□□ 0.55
Polr1aO35134 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
Polr1aO35134 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm17709-201ENSMUST00000174536 1096 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC18.46■□□□□ 0.55
Polr1aO35134 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm45592-201ENSMUST00000209605 1043 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 AC102368.1-201ENSMUST00000227161 892 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr1aO35134 Gm16380-201ENSMUST00000077997 478 ntBASIC18.46■□□□□ 0.55
Polr1aO35134 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Polr1aO35134 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC18.45■□□□□ 0.54
Polr1aO35134 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Polr1aO35134 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr1aO35134 Gm25053-201ENSMUST00000103982 133 ntBASIC18.45■□□□□ 0.54
Polr1aO35134 Gm25922-201ENSMUST00000104281 130 ntBASIC18.45■□□□□ 0.54
Polr1aO35134 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC18.45■□□□□ 0.54
Polr1aO35134 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC18.45■□□□□ 0.54
Polr1aO35134 Gm24679-201ENSMUST00000158762 111 ntBASIC18.45■□□□□ 0.54
Polr1aO35134 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms