Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm28292-201ENSMUST00000186593 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm28101-201ENSMUST00000187608 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm29076-201ENSMUST00000187689 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm28302-201ENSMUST00000187931 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm28646-201ENSMUST00000188220 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm28205-201ENSMUST00000189177 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm29032-201ENSMUST00000189797 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm28695-201ENSMUST00000190300 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm37448-201ENSMUST00000192795 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm37666-201ENSMUST00000194110 866 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Ebf3O08791 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ebf3O08791 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.74□□□□□ -0.37
Ebf3O08791 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ebf3O08791 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.74□□□□□ -0.37
Ebf3O08791 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.74□□□□□ -0.37
Ebf3O08791 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.74□□□□□ -0.37
Ebf3O08791 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.74□□□□□ -0.37
Ebf3O08791 Mir1943-201ENSMUST00000158276 73 ntBASIC12.74□□□□□ -0.37
Ebf3O08791 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.74□□□□□ -0.37
Ebf3O08791 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.74□□□□□ -0.37
Ebf3O08791 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Ebf3O08791 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.74□□□□□ -0.37
Ebf3O08791 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ebf3O08791 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf3O08791 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf3O08791 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Ebf3O08791 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms