Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Raet1aO08602 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Raet1aO08602 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Raet1aO08602 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Raet1aO08602 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Raet1aO08602 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Raet1aO08602 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.86□□□□□ -0.67
Raet1aO08602 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.86□□□□□ -0.67
Raet1aO08602 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.86□□□□□ -0.67
Raet1aO08602 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Raet1aO08602 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm11531-201ENSMUST00000117614 555 ntBASIC10.86□□□□□ -0.67
Raet1aO08602 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Raet1aO08602 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Raet1aO08602 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm5950-201ENSMUST00000213337 772 ntBASIC10.86□□□□□ -0.67
Raet1aO08602 Gm5186-201ENSMUST00000218781 920 ntBASIC10.86□□□□□ -0.67
Raet1aO08602 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.86□□□□□ -0.67
Raet1aO08602 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.86□□□□□ -0.67
Raet1aO08602 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Raet1aO08602 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Raet1aO08602 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Raet1aO08602 Gm15370-201ENSMUST00000117158 253 ntBASIC10.85□□□□□ -0.67
Raet1aO08602 Gm13297-201ENSMUST00000120205 934 ntBASIC10.85□□□□□ -0.67
Raet1aO08602 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.85□□□□□ -0.67
Raet1aO08602 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.85□□□□□ -0.67
Raet1aO08602 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Gm6013-201ENSMUST00000212264 699 ntBASIC10.85□□□□□ -0.67
Raet1aO08602 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Raet1aO08602 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.85□□□□□ -0.67
Raet1aO08602 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Raet1aO08602 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Raet1aO08602 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Raet1aO08602 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Raet1aO08602 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms