Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.58□□□□□ -0.4
Atf6F6VAN0 Gm29396-201ENSMUST00000185659 716 ntBASIC12.58□□□□□ -0.4
Atf6F6VAN0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Gm10608-202ENSMUST00000213924 676 ntBASIC12.58□□□□□ -0.4
Atf6F6VAN0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm24934-201ENSMUST00000103764 111 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm13392-201ENSMUST00000117708 150 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm13786-201ENSMUST00000122371 333 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm37489-201ENSMUST00000191883 159 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm42627-201ENSMUST00000197347 224 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm7046-201ENSMUST00000221351 977 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.57□□□□□ -0.4
Atf6F6VAN0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atf6F6VAN0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.56□□□□□ -0.4
Atf6F6VAN0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Gm25214-201ENSMUST00000104573 129 ntBASIC12.56□□□□□ -0.4
Atf6F6VAN0 Gm11531-201ENSMUST00000117614 555 ntBASIC12.56□□□□□ -0.4
Atf6F6VAN0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.56□□□□□ -0.4
Atf6F6VAN0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms