Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm18038-201ENSMUST00000197900 485 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.1□□□□□ -0.47
Srp54bE9PXC0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Srp54bE9PXC0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Gm44100-201ENSMUST00000204329 436 ntBASIC12.09□□□□□ -0.47
Srp54bE9PXC0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.09□□□□□ -0.47
Srp54bE9PXC0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Gm17827-201ENSMUST00000211825 742 ntBASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Srp54bE9PXC0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Srp54bE9PXC0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.08□□□□□ -0.47
Srp54bE9PXC0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.08□□□□□ -0.47
Srp54bE9PXC0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms