Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm25018-201ENSMUST00000179081 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm25212-201ENSMUST00000179432 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm20091-201ENSMUST00000179683 189 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm26391-201ENSMUST00000179843 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm37365-201ENSMUST00000193109 409 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm18001-201ENSMUST00000212023 688 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm9701-201ENSMUST00000077976 427 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm24089-201ENSMUST00000093696 109 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm5259-201ENSMUST00000191231 800 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm7445-201ENSMUST00000192115 340 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm11660-201ENSMUST00000120955 412 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm14176-201ENSMUST00000121302 477 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm9089-201ENSMUST00000122027 526 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm7504-201ENSMUST00000201449 424 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm22937-201ENSMUST00000103954 131 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm14021-201ENSMUST00000117683 961 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Gm13426-201ENSMUST00000117887 795 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.84□□□□□ -0.51
Col6a3E9PWQ3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a3E9PWQ3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a3E9PWQ3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Gm27440-201ENSMUST00000184785 107 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms