Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Gm15566-201ENSMUST00000121130 590 ntBASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.13□□□□□ -0.15
Clrn2B2RVW2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn2B2RVW2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm14585-201ENSMUST00000120713 634 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm7666-201ENSMUST00000146631 819 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm38210-201ENSMUST00000191944 809 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm34023-201ENSMUST00000195539 217 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn2B2RVW2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms