Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chd3B1AR17 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd3B1AR17 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chd3B1AR17 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd3B1AR17 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd3B1AR17 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd3B1AR17 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd3B1AR17 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.98□□□□□ -0.49
Chd3B1AR17 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Gm17391-201ENSMUST00000171036 126 ntBASIC11.98□□□□□ -0.49
Chd3B1AR17 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.98□□□□□ -0.49
Chd3B1AR17 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.98□□□□□ -0.49
Chd3B1AR17 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd3B1AR17 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Chd3B1AR17 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Chd3B1AR17 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chd3B1AR17 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Chd3B1AR17 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Chd3B1AR17 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Gm11331-201ENSMUST00000119764 288 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd3B1AR17 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Chd3B1AR17 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chd3B1AR17 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Chd3B1AR17 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.97□□□□□ -0.49
Chd3B1AR17 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd3B1AR17 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
Chd3B1AR17 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Map1b-203ENSMUST00000223725 2669 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Gm15711-201ENSMUST00000118889 535 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 Gm8199-201ENSMUST00000121323 823 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Gm37246-201ENSMUST00000192665 835 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms