Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm24749-201ENSMUST00000157838 343 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm17040-202ENSMUST00000170597 889 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm27552-201ENSMUST00000183351 62 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm27844-201ENSMUST00000183613 62 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm32999-201ENSMUST00000192693 562 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm44100-201ENSMUST00000204329 436 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cfap99A0A140LIX9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm12015-201ENSMUST00000117065 843 ntBASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm14832-201ENSMUST00000121289 322 ntBASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm16296-201ENSMUST00000159905 325 ntBASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm17812-201ENSMUST00000204935 318 ntBASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cfap99A0A140LIX9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms