Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm29608-201ENSMUST00000190444 463 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm29667-201ENSMUST00000190817 490 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm42599-201ENSMUST00000201308 469 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm44872-201ENSMUST00000207864 420 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm16372-201ENSMUST00000073088 450 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm9630-201ENSMUST00000178304 885 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm38297-201ENSMUST00000195122 1057 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms