Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 CT009713.10-201ENSMUST00000225013 1986 ntBASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm44344-201ENSMUST00000200287 129 ntBASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm42599-201ENSMUST00000201308 469 ntBASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm45677-201ENSMUST00000209975 1341 ntBASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm42690-201ENSMUST00000197921 1836 ntBASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav8-1A0A075B641 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm44260-201ENSMUST00000204946 2094 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms