Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gm23596-201ENSMUST00000104304 132 ntBASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcb1Q9Z0H3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Gm23085-201ENSMUST00000157849 293 ntBASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcb1Q9Z0H3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcb1Q9Z0H3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm13035-201ENSMUST00000117496 342 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm9062-201ENSMUST00000117712 727 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm14724-201ENSMUST00000118400 537 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm12501-201ENSMUST00000119163 529 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm3332-201ENSMUST00000189337 928 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm4482-201ENSMUST00000200876 742 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Gm807-202ENSMUST00000224929 408 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms