Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm38266-201ENSMUST00000194931 421 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm10608-202ENSMUST00000213924 676 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm9368-201ENSMUST00000219348 831 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm26035-201ENSMUST00000083065 308 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Olfr582-201ENSMUST00000098212 960 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm12241-201ENSMUST00000118330 726 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm13492-201ENSMUST00000119772 665 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm13297-201ENSMUST00000120205 934 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm13316-201ENSMUST00000140537 691 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm16296-201ENSMUST00000159905 325 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm24526-201ENSMUST00000082921 158 ntBASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim3Q9R1R2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Gm15370-201ENSMUST00000117158 253 ntBASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Gm14723-201ENSMUST00000118686 215 ntBASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim3Q9R1R2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms