Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf4Q9QZS2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm13223-201ENSMUST00000118609 747 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm9797-201ENSMUST00000052902 613 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf4Q9QZS2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf4Q9QZS2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf4Q9QZS2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf4Q9QZS2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms