Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm11637-201ENSMUST00000120601 592 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm17208-201ENSMUST00000168388 535 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim39Q9ESN2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm12390-201ENSMUST00000117897 397 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm17150-201ENSMUST00000165577 381 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm37042-201ENSMUST00000193816 581 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms