Protein–RNA interactions for Protein: Q9DBT3

Ccdc97, Coiled-coil domain-containing protein 97, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97Q9DBT3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.58□□□□□ -0.4
Ccdc97Q9DBT3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc97Q9DBT3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc97Q9DBT3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms