Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim13Q9CYB0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim13Q9CYB0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm12928-201ENSMUST00000117115 573 ntBASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm12384-201ENSMUST00000119228 919 ntBASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Mir6392-201ENSMUST00000184924 108 ntBASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm2495-201ENSMUST00000191160 466 ntBASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim13Q9CYB0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm16296-201ENSMUST00000159905 325 ntBASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm18018-201ENSMUST00000198273 408 ntBASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm44882-201ENSMUST00000205702 802 ntBASIC11.32□□□□□ -0.6
Trim13Q9CYB0 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms