Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Matn2-203ENSMUST00000226766 3252 ntBASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Gm12314-201ENSMUST00000118104 538 ntBASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Gm39404-201ENSMUST00000216350 313 ntBASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Gm10076-201ENSMUST00000073238 384 ntBASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Khdc3Q9CWU5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.77□□□□□ -0.52
Khdc3Q9CWU5 Gm10434-201ENSMUST00000101158 471 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm13875-201ENSMUST00000120162 282 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm9083-201ENSMUST00000120423 819 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm17420-201ENSMUST00000164753 153 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm37201-201ENSMUST00000191845 523 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Khdc3Q9CWU5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm12058-201ENSMUST00000118614 437 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm14999-201ENSMUST00000121039 624 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms