Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm11478-201ENSMUST00000117851 599 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm12384-201ENSMUST00000119228 919 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm12490-201ENSMUST00000120255 560 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm37042-201ENSMUST00000193816 581 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Gm12138-201ENSMUST00000122180 951 ntBASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Ska1Q9CPV1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms