Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm22133-201ENSMUST00000102082 109 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm28882-201ENSMUST00000185504 314 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm11949-201ENSMUST00000117640 372 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm12712-201ENSMUST00000120676 801 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm4462-201ENSMUST00000166453 492 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm6450-201ENSMUST00000200896 574 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col25a1Q99MQ5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col25a1Q99MQ5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 274.2 ms