Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm12502-201ENSMUST00000120197 444 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm42599-201ENSMUST00000201308 469 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm7561-201ENSMUST00000211203 886 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm5035-201ENSMUST00000215581 927 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkd1Q99MH6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkd1Q99MH6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms