Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm22144-201ENSMUST00000157402 102 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Mir7076-201ENSMUST00000183519 74 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm27910-201ENSMUST00000185004 107 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm2965-201ENSMUST00000198365 343 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-1Q99MA9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm14724-201ENSMUST00000118400 537 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm12516-201ENSMUST00000120819 385 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Mir1901-201ENSMUST00000122616 78 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm22138-201ENSMUST00000158748 128 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx6-1Q99MA9 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms