Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Gm3890-201ENSMUST00000182416 207 ntBASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Gm27390-201ENSMUST00000184516 176 ntBASIC11.88□□□□□ -0.51
Vmp1Q99KU0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Gm7399-201ENSMUST00000032395 858 ntBASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Vmp1Q99KU0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Gm9823-201ENSMUST00000051212 327 ntBASIC11.87□□□□□ -0.51
Vmp1Q99KU0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vmp1Q99KU0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Gm14921-201ENSMUST00000118643 908 ntBASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Gm43118-201ENSMUST00000199149 775 ntBASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vmp1Q99KU0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms