Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm11591-201ENSMUST00000120063 702 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm12502-201ENSMUST00000120197 444 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm18584-201ENSMUST00000203098 964 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm10076-201ENSMUST00000073238 384 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gm25007-201ENSMUST00000083808 133 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.18□□□□□ -0.62
Lims1Q99JW4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lims1Q99JW4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm6222-202ENSMUST00000182143 629 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm9136-201ENSMUST00000193368 454 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm42937-201ENSMUST00000197360 752 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms